BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB007H01SP1|AL425770
(670 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1448 1288 0.0
>3x_Contig1448
Length = 10333
Score = 1288 bits (644), Expect = 0.0
Identities = 659/670 (98%)
Strand = Plus / Minus
Query: 1 acgaatacactccctttggcggagtacaacgtaacawatcaacccccatgatcattccac 60
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 1981 acgaatacactccctttggcggagtacaacgtaacaaatcaacccccatgatcattccac 1922
Query: 61 ctgaaccgatccttttcctcgctacttgtgaycaggcacccggcgcaaacccaagatcta 120
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 1921 ctgaaccgatccttttcctcgctacttgtgaccaggcacccggcgcaaacccaagatcta 1862
Query: 121 aaactttctgattttgtttgaagaaccggtatttatcatcaatgtccattaatttgaatg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1861 aaactttctgattttgtttgaagaaccggtatttatcatcaatgtccattaatttgaatg 1802
Query: 181 ctgctctggacctaaactgctgttcctttgcagccttggtgaaatgatcattcttttgcc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1801 ctgctctggacctaaactgctgttcctttgcagccttggtgaaatgatcattcttttgcc 1742
Query: 241 tcgctaaccaacggttctgcgcattagaattgtatcttactagccgtagcacaaacggag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1741 tcgctaaccaacggttctgcgcattagaattgtatcttactagccgtagcacaaacggag 1682
Query: 301 tstacctatactgaggtgtgatcaaaggctgtwacacagaattyatccctacaatgatty 360
| ||||||||||||||||||||||||||||| |||||||||| |||||||||||||||
Sbjct: 1681 tgcacctatactgaggtgtgatcaaaggctgtaacacagaattcatccctacaatgattc 1622
Query: 361 agtattcgcatgcagcaccgtgctacctttaactgtycaggtattgcatatttgacattt 420
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 1621 agtattcgcatgcagcaccgtgctacctttaactgtccaggtattgcatatttgacattt 1562
Query: 421 tacagccttaacttttgattgttagtacatattccacaggagawaccttaaaatataaca 480
|||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||
Sbjct: 1561 tacagccttaacttttgattgtcagtacatattccacaggagaaaccttaaaatataaca 1502
Query: 481 ccgatgagatacaaataaaggtgaatwaggaagtacgtgcactttgcgagttctctaaca 540
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 1501 ccgatgagatacaaataaaggtgaataaggaagtacgtgcactttgcgagttctctaaca 1442
Query: 541 ggacggactacgaactatgcagcttagaggacaacttcaagtctcatctggaccttatga 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1441 ggacggactacgaactatgcagcttagaggacaacttcaagtctcatctggaccttatga 1382
Query: 601 tgctacttggcaagcgaatagccattaacccacacaccgcataatggttaaggatagtga 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1381 tgctacttggcaagcgaatagccattaacccacacaccgcataatggttaaggatagtga 1322
Query: 661 cacaatttaa 670
||||||||||
Sbjct: 1321 cacaatttaa 1312
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.39 0.713 1.32
Gapped
Lambda K H
1.39 0.713 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3458
Number of Sequences: 1807
Number of extensions: 3458
Number of successful extensions: 70
Number of sequences better than 1.0e-20: 1
length of query: 670
length of database: 10,358,551
effective HSP length: 16
effective length of query: 654
effective length of database: 10,329,639
effective search space: 6755583906
effective search space used: 6755583906
T: 0
A: 40
X1: 5 (10.0 bits)
X2: 14 (28.0 bits)
S1: 12 (24.5 bits)
S2: 50 (100.5 bits)